Downloading mmseqs databases !
# mmseqs databases Usage: mmseqs databases [options] Name...e, since Swiss-Prot has a value yes in the Taxonomy column above, all necessary files to use it as a valid seqTaxDB...958 days ago
Perl onliner to check the ids in two files !
perl -lane 'BEGIN{open(A,"ids2.txt"); while(){chomp; $k{$_}++}} if (defined($k{$F[0]})) {print "$_\t$F[0]\t1"} else {print "$_\tNA\t0"}; ' ids1.txt > aaa.xls943 days ago
Installing manadatory software for websites hosting !
#See all the installed apt list --installed apt list #Installing Apache #To i...ql-server sudo systemctl status mysql #Remove PHP and all his libraries and files sudo apt-get purge php7.*...932 days ago
Installing manadatory software for websites hosting !
#See all the installed apt list --installed apt list #Installing Apache #To i...ql-server sudo systemctl status mysql #Remove PHP and all his libraries and files sudo apt-get purge php7.*...932 days ago
Run Pango on your multifasta file !
#More at https://cov-lineages.org/resources/pangolin/usage.html (base) [jnarayan...equence QC ** Number of sequences detected: 320 Total passing QC: 293 Data files found: Trained model: /home/...903 days ago
854 days ago
Install Install Gffcompare on Ubuntu / Linux
#Gffcompare is a program that is used to perform operations on general feature format (GFF) and general transfer format (GTF) files. It has a binary distribution...839 days ago
839 days ago
Bash script to transfer files to server !
# rsync options source destination rsync -azvh --progress PacBio_clean.fa xxx@xxx.xxx.res.in:/home/ # scp source_file_name username@destination_host:destination_folder scp –rpv /datafile xxx@192.168.1.100:/home/me819 days ago
Bash script to find difference between two files !
#lines which are exist only in file2: grep -Fxvf file1 file2 > file3 #lines which are exist only in file1: grep -Fxvf file2 file1 > file3 #lines which are exist in both files: grep -Fxf file1 file2 > file3788 days ago