How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data...lowing error message. In this example, XML::Parser Perl module is missing. Can't locate XML/parser.pm in @INC (@INC contains:/us...e, let us search, download and install XML::Parser Perl module. I have downloade...3947 days ago
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon”) is a collection of contiguous gene...sequences (scaffolds, chromosomes, BACs, etc.). Based on tab – delimited BLAST...2608 days ago
A Brief Bioinformatics Tutorial
This is about how to use a computer to find what is known about a gene of interest and also how to get new insight...you will see how to look efficiently for a particular protein sequence, how to blast...3634 days ago
YASS :: genomic similarity search tool
YASS is a genomic similarity search tool, for nucleic (DNA/RNA) sequences in fasta or plain text format (it p...of the heuristic pairwise local alignment tools for DNA sequences (FASTA, BLAST, PATTERNHUNTER, BLASTZ...2922 days ago
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Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take a file of short sequence reads and a file of quali...mic sequencing data for alignment, assembly, and/or BLAST identification. BugBuilder &...large genomes in the clouds BEAP 0.6 beta – Blast...2683 days ago
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Useful Links for Bioinformaticians
Bioinformatics demands knowledge of various inter-linked subjects. This page provide links of some the good co...arson talks about Protein Evolution Biological Sequences and Information BLAST HELP MANUAL BLAST...3128 days ago
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Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.... BLAST : Eak khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST kiya. NCBI wale Data le jaye...aun. Algo Banya Apne. MOTIF mil gaya. BLASTa...3916 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatician...nome make very fast, very accurate mistakes. Let's BLAST it. Some genome never has tr...develops random features. Go watch CINEMA and have BLAST.3718 days ago
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Bioinformatics 101 - Running BLAST
How to format the database for BLAST, run the command, view the output file, and use BioPerl and Perl to parse the output. By David Francis, Ohio State University. Deli...3894 days ago
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Install BLAST in Ubuntu/Linux and Window !
#On ubuntu sudo apt-get install ncbi-blast+ #Ubuntu Conda installation conda install -c bioconda blast #Windows installation Fir...Download ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.7.1/ncbi...instead http://ftp.ncbi.nlm.nih.gov/blast/...1144 days ago