Results for "BLAST Parser"
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CroCo is a program to detect cross contamination events in assembled transcriptomes using sequencing reads to dete...t of transcripts that are suspiciously similar across samples using a pairwise BLAST...1939 days ago
TwinBLAST: When Two Is Better than One
TwinBLAST is a web-based tool for viewing 2 BLAST reports simultaneouslyside-by-side. It uses ExtJS...ls. BioPerl (www.bioperl.org) is used to indexraw BLAST reports and Bio::Graphics is used to draw pictograms of the BLASTh...1696 days ago
- Magic-BLAST is a tool for mapping large next-generation RNA or DNA sequencing runs against a whole genome or trans...dding up the score of all exons. This is very different from other versions of BLAST,...
1501 days ago
PyParanoid: a pipeline for rapid identification of homologous gene families in a set of genomes
PyParanoid is a pipeline for rapid identification of homologous gene families in a set of genomes - a central task...s) which depends on performing a all-vs-all sequence comparison, usually using BLAST,...1355 days ago
CRBHits: From Conditional Reciprocal Best Hits to Codon Alignments and Ka/Ks in R
CRBHits is a coding sequence (CDS) analysis pipeline in R (R Core Team, 2019). It reimplements the Conditional Reciprocal Best Hit (CRBH) algorithm crb-blast...1264 days ago
MMseqs2: ultra fast and sensitive sequence search and clustering suite
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluste...calability. MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it ac...m profile searches with the same sensitivity as PSI-BLAST...1197 days ago
MMseqs2: ultra fast and sensitive sequence search and clustering suite
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluste...calability. MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it ac...m profile searches with the same sensitivity as PSI-BLAST...936 days ago
Fix rewritable error of ELGG !
The mod_rewrite module uses a rule-based rewriting engine, based on a PCRE regular-expression parser, to rewrite requested URLs on...896 days ago
- ElasticBLAST is a new way to BLAST large numbers of queries...reasons you should use ElasticBLAST: 1. ElasticBLAST can handle...LARGER queries! ElasticBLAST can search query sets that ha...rter time than you could with BLAST+. 3. ElasticBLAST is EASY to...
601 days ago
- Kablammo helps you create interactive visualizations of BLAST results from your web browser. Find your most interesting alignments, list detailed parameters for each, and export a publication-ready vector image, all without installing any software.
566 days ago
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