Filtlong: quality filtering tool for long reads
...ich reads pass the filter. Filtlong builds into a stand-alone executable: git clone https://github.com/rrwick/Filtlong.git cd Filtlong make -j bin/filtlong -h...1452 days ago
CAT/BAT: tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs)
Contig Annotation Tool (CAT) and Bin Annotation Tool (BAT) are pipelines for the taxonomic classification of long DNA sequences and metagenome assembled genomes (MAGs/bins) of both known and (highly)...1447 days ago
SqueezeMeta: a fully automated metagenomics pipeline, from reads to bins
...mes and the retrieval of individual genomes via binning procedures. Thus, Squeeze...via merging of individual metagenomes Includes binning and bin checking, for ret...eps inform about the consistency of contigs and bins, allowing to spot potential...1356 days ago
Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data
...n in C++ for GNU Linux/Unix platforms. After uncompressing the source package, you can find an executable file ktrim under bin/ directory compiled usin...1177 days ago
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