Results for "Bio Networks"
Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief de...e Simulation http://www.wyomingbioinformatics.org/liberlesgroup/...reconstructed phylogeny http://bioserv.rpbs.univ-paris-diderot.f...nome simulation program http://biostat.mc.vanderbilt.edu/wiki/ma...pulation dynamics https://bcrc.bio.umas...3750 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in...is a gold-standard dataset of biologically relevant binding sit...t of Computational and System Biology at the University of Pitt...ite prediction: http://www.scfbio-iitd.res.in/dock/ActiveSite_n...ond webserver, MAPPIS (http://bioinfo3...3757 days ago
Next generation sequencing in R or bioconductor environment
...some of them are as follows Biostrings The Biostrings package from Bioconductor provides an advanced...manipulation of large sets of biological sequences. The objects...genomic locations within the Bioconductor project. It is built...ucture for interacting with a Biostring based genome sequence....3637 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and ref...q software that extends the CLCbio Main Workbench software. Incl...techfak.uni-bielefeld.de/swift/biolib.is library and a set of sc...uan at CSHL. (published in BMC Bioinformatics). POSIX OS require...nd Ewan Birney at the European Bioinfor...3532 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and r...q software that extends the CLCbio Main Workbench software. Incl...uan at CSHL. (published in BMC Bioinformatics). POSIX OS require...quence. Developed with Applied Biosystem's colourspace genomic r...Sequence Reads. Authors are Fabio De B...3255 days ago
Comprehensive list of visualization tools for biological pathways
...and signaling pathways. These biological pathways and networks are not only an appropri...st of visualization tools for biological pathways: BiNA Drawings of metabolic networks supporting hiding of cof...f metabolomic data within the biological context of metabolic pathwa...2300 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biological functions. In this section we include tools that can assist in prediction of interaction sites on protein...2215 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...available for every user Biodatomics Open source platfo...s machine learning model with biology and statistics to predict...s of sequence info and neural networks to process information...tution or indel has impact on biological function of the protein; &l...2921 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that...°), still reads CGAAGC. The European Molecular Biology Open Software Suite (EMBO...viding the EMBOSS tools, for example: Wageningen Bioinfor...2224 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence re...nce Assembler is revolutionary bioinformatics software for autom...ntly Illumina, 454 and Pacific Biosciences). NanoMark &ndas...e described in the Genome Biology manuscript. mi...More Tools at http://bioinfor...2698 days ago
