Most Commonly used Awk by Bioinformatician
...nice explanations of those one-liners. After reading this you'll have a pretty good grasp! http://www.catonmat.net/blog/awk-one-li … -part-one/ http://www.catonmat.net/blog/ten-awk-ti … -pitfalls...3909 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quantitative genetics in plants. Jiménez-Gómez, Frontiers in Plant Science 2:77, 2011 Full Text [equally relevant...3776 days ago
Commercial and public next-gen-seq (NGS) software
...iomedcentral.com/1471-2105/14/S7/S10 Reference Illumina has a software list: http://www.illumina.com/pagesnrn.ilmn?ID=245. Some softwares in his blog (http://www.fejes.ca/labels/D...3515 days ago
2866 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as the input. Since the quality-value file for the high throughput shor...2682 days ago
Awesome perl frameworks, libraries and software - PART 1
...r Java elastic/elasticsearch-perl - New Perl low-level client blogs-perl-org/blogs.perl.org - Templates an...nections, SSL and NZB). ati/ljsm - perl script for LiveJournal blog backup vti/underscore-perl&n...2486 days ago
Some useful Bioinformatics links
...vezzi/FRC_align: Computes FRC from SAM/BAM file and not from afg files https://mail.google.com/mail/u/0/#inbox Read GTF file into R - Dave Tang's blog https://davetang.org/muse/20...2238 days ago
Installing Bio::SCF perl module
...recent version of Perl (version 5.8 or above). More about the basic perl module installation steps check this http://bioinformaticsonline.com/blog/view/710/how-to-install-perl-...2215 days ago