2152 days ago
2692 days ago
A guide for complete R beginners :- Getting data into R
...quo;?function’ Histogram of A hist(mydata$A) If there was more data we could increase the number of vertical columns with the option, breaks=50 (or another relevant numbe...3356 days ago
Tools for Searching Repeats And Palindromic Sequences
...rmation during gene amplification. Other studies have attempted to relate palindrome formation to molecular mechanisms involved in double stranded breaks and in the formation of inver...2210 days ago
Breaking chromosomes to study cancer !!!
...This page describes what happens when someone has a reciprocal translocation. Reciprocal chromosomal translocations occur following double-strand breaks (DSBs) in DNA when a section...3578 days ago
Plot the clock using Lastz -gerenal outfile
use strict; use warnings; use Statistics::R ; use List::Util qw(sum); #Usage perl clockPlot.pl Palindrome.palfc 1500 my $R = Statistics::R->new() ; $R->startR...2297 days ago
Perl script to break the contigs by 'N'
...ce my $seq = $seqobj->seq; my $lenseq=length $seq; $seq = uc $seq; #now all bases are in uppercase #Searches for NNNNN regions (scaffold breaks) #Hash nregions stores a ha...2061 days ago
Breaking chromosomes to study cancer !!!
Chromosomes are present in every cell of our body and they contain the information the body needs to develop and function properly. This information is carried in genes that are arranged along the chromosomes. There are usually 46 chromosomes in every cell. These chromosomes come in pairs, one fr...Tags: Bioinformatics, Chromosome, Breaks, Translocation
3578 days ago
Dynamic chromosome breakpoints !!!
Cell division involves the distribution of identical genetic material, DNA, to two daughters’ cells. During this process, duplicated deoxyribonucleic acid (DNA) goes through a condensation and decondensation process. This is followed by nuclear envelope dissolution, mitotic spindle assembly...Tags: Bioinformatics, Genome, Chromosome, Breaks, Breakpoints, EBRs, Recombination, Cross-over, Abnormalities, DNA
3551 days ago