Results for "Browser"
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AlignQC: A tool for assessing an alignment, and generating reports that are easy to share
...y vs read sizes, error patterns, annotations and rarefraction curve analysis. The most basic analysis only requires a BAM file, and outputs a web browser compatible xhtml to visualize...2096 days ago
pyGenomeTracks: Standalone program and library to plot beautiful genome browser tracks
pyGenomeTracks aims to produce high-quality genome browser tracks that are highly customizable. Currently, it is possible to plot: bigwig bed (many options) bedgraph links (represented as arcs) Hi-C matrices (if HiCExplorer is installed)2002 days ago
- ASCIIGenome is a genome browser based on command line interface and designed for running from console terminals. Since ASCIIGenome does not require a graphical interfa...
2002 days ago
visNetwork: an R package for network visualization, using vis.js javascript library
... API, and even more with special features for R : easy to use custom shapes, styles, colors, sizes, … works smooth on any modern browser for up to a few thousand node...1941 days ago
GenoViz: Visualization software for genomics
...nd data sharing in genomics. Our flagship product is Integrated Genome Browser (IGB).For more information ab...pository at http://www.bitbucket.org/lorainelab/integrated-genome-browser. We are still using SourceFor...1948 days ago
GenomeView: genome browser and annotation editor
GenomeView is a genome browser and annotation editor that displays reference sequence, annotation, multiple alignments, short read alignments and graphs. Most major data formats ar...1948 days ago
- ...ve horizontal gene transfers. BMC Genomics. 2014. 15:717. Usage: Simply execute perl HGTector.pl, or, open GUI.html in a web browser to see a step-by-step wizard....
1929 days ago
gEVAL: Genome Evaluation Browser
The gEVAL Browser allows the evaluation of genome assemblies through its tools and pre-computed analyses. The strength of this browser is the ability to navigate an...1781 days ago
- ...shed_variants.vcf file, that contains all the refined variants. Sometimes it is helpful to look at the polished sequence, e.g. with the IGV browser. In that case you want SViper...
1594 days ago
BlobToolKit: A toolkit for genome assembly QC
...nbsp;approach to simplify interactive and reproducible filtering. BlobToolKit is comprised of four components: BlobToolKit Viewer allows browser-based interactive visualisati...1534 days ago
