Results for "Building"
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Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Ill...ith restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting p...2993 days ago
- ...e SAM specification and the VCF specification. Note that the information on this page is targeted at end-users. For developers, the source code, building instructions and implementati...
2928 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archaeal genomes. It works by offering a standard so...2930 days ago
- ...ry approaches for the analysis of chromatin interaction datasets. To fill this gap, we developed a web-based application, QuIN, which enables: 1) building and visualizing chromatin int...
2869 days ago
Many-Core Engine (MCE) for Perl example
...configured automatically as well as spawning and shutdown. MCE::Loop Provides a parallel loop utilizing MCE for building creative loops. MCE::Flow A parallel flow model for building creative applications. This m...2651 days ago
- Our basic strategy in building homology maps is to use exons that are orthologous in multiple genomes as map "anchors." Given K genomes, the steps in the map construction are as fo...
2645 days ago
DarkHorse: a method for genome-wide prediction of horizontal gene transfer
...ed. The method is quantitative, reproducible, and computationally undemanding. It can be combined with genomic signature and/or phylogenetic tree-building procedures to improve accurac...2509 days ago
Building Web UIs With Mojolicious Perl
Mojolicious is one of 3 leading web frameworks available in the perl ecosystem (along with Dancer and Catalyst) and by far my favorite. Mojolicious aims to provide a co...2322 days ago
mojolicious: a next generation web framework for the Perl programming language.
...n support. Built-in non-blocking I/O web server, supporting multiple event loops as well as optional pre-forking and hot deployment, perfect for building highly scalable web services....2305 days ago
ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data
...and providing a novel set of standalone tools to perform common tasks in comparative genomics and phylogenetics. The new features include (i) building gene-based and supermatrix-ba...2267 days ago
