Results for "CAT/BAT"
Comments
Comment on "KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies"
Using KAT again (You will need the modules: KAT/2.1.1 and gnuplot/4.6.5) – we can plot the kmer content of the assembly compared to the kmer conten...1352 days ago
Comment on "HALC: High throughput algorithm for long read error correction"
Inputs Long reads in FASTA format. Contigs assembled from the corresponding short reads in FASTA format. The initial short reads in FASTA format (only...2106 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
r2cat (related reference based contig arrangement tool) can be used to order a set of contigs with respect to a single reference genome. This is done by mapping the con...3689 days ago
Comment on "Bioinformatics approach to Boar Taint"
ISMB/ECCB 2011 Application of whole genome resequencing to detect sequence polymorphisms underlying boar taint http://www.iscb.org/archive/conferences/iscb/cms_addon...3932 days ago
