Results for "Chimeric"
Bookmarks
...npoints synthetic errors in both single and metagenomic assemblies, including single-base errors, insertions/deletions, genome rearrangements and chimeric assemblies presented in metag...2946 days ago
Bioinformatics tools and software
.... UPARSE >OTU clustering for 16S and other marker genes. Highly accurate OTU sequences and improved diversity measures. UCHIME >Chimeric sequence detection. PILE...2876 days ago
Porechop: tool for finding and removing adapters from Oxford Nanopore reads
...dapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate rea...2183 days ago
RaGOO: Fast Reference-Guided Scaffolding of Genome Assembly Contigs
...mosome construction takes less than a minute and the whole pipeline with SV calling takes ~2 minutes. Intact ordering and orienting of contigs. Chimeric contig correction GFF lift-o...1859 days ago
- ...om Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate rea...
1568 days ago
BlobToolKit: A toolkit for genome assembly QC
Filtering raw genomic datasets is essential to avoid chimeric assemblies and to increase the validity of sequence-based biological inference. BlobToolKit extends the BlobTools1/Blobolo...1550 days ago
Alvis: a tool for contig and read ALignment VISualisation and chimera detection
...at accepts input in a variety of alignment formats and will output production ready vector images. Additionally, Alvis will highlight potentially chimeric reads or contigs, a common so...12 days ago
