Results for "Comparative Genomes"
Bookmarks
Kaiju is a program for the taxonomic classification of metage...default, Kaiju uses either the available complete genomes from NCBI RefSeq or the micro...with a protein database comprising 4821 microbial genomes. Kaiju can also be used for q...2875 days ago
Bioinformatics tools and software
USEARCH >Extreme high-throughput sequence analysis. Orders of magnitude faster than BL...ome repeat finder. PILER-CR >Detection of CRISPR repeats in bacterial genomes. QSCORE >Compare two...2867 days ago
- Genome STRiP (Genome STRucture In Populatio...across and within a set of sequenced genomes to detect variation. The meth...gle-end reads. A minimum of 20 to 30 genomes are required to get acceptabl...ch as a set of genomes from the 1000 Genomes Project. The background...
2805 days ago
- OrganellarGenomeDRAW is dedicated to convert genetic information stored in GenBank e...dapted for the creation of high-quality, detailed circular maps of organellar genomes like the plastid genome (plas...
2825 days ago
- gKaKs is a codon-based genome-level Ka/Ks computation pipeline developed and based on pro...oorly assembled scaffold dataset. It is especially useful for newly sequenced genomes that have not been well annot...
2812 days ago
Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny bloc...ared by pigs and cattle) were detected using the pig and human genomes as a reference, respectively.2740 days ago
Method in Comparative genomics !!
...date function for novel motifs. Our results demonstrate the power of comparative genomics to further our under...al knowledge in yeast, and will be invaluable in the study of complex genomes like that of human.2740 days ago
- ACT is a Java application for displaying pairwise comparisons between two or more DNA seq...be used to identify and analyse regions of similarity and difference between genomes and to explore conservation o...
2804 days ago
- Gene finding in eukaryotic genomes is notoriously difficult to automate. The task is to design a work flow with a minimal set of tools that would reach state-of-the-art performance a...
1957 days ago
- Redundans pipeline assists an assembly of heterozygous genomes.Program takes as input assembled contigs, paired-end...d, so it can be run even on the laptop for small-to-medium size genomes flexible toward many se...
2809 days ago
