3033 days ago
2963 days ago
Genome Assembly Tools and Software - PART2 !!
...Assembly Evaluation Metrics and Reportin) is a complete genome analysis package that helps you evaluate and report on a genome assembly’s completeness, correctness, and contiguity....2709 days ago
Genome Assembly Tools and Software - PART1 !!
...the form of contigs). Then we merge the constructed contigs to more completeness ones.2.Scaffolding. We use pa.... BUSCO v1.1b1 – Assessing Genome Assembly and Annotation Completeness with Single-copy Orthologs...2709 days ago
3885 days ago
gVolante: Completeness Assessment of Genome/Transcriptome Sequences
A brand-new web server, gVolante, which provides an online tool for (i) on-demand completeness assessment of sequence sets by means of the previously developed pipelines CEGMA and BUSCO and (ii) browsing pre-computed completeness scores for publicly available data in its database sectionTags: gVolante, Completeness, Assessment, Genome, Transcriptome, Sequences
1963 days ago
gVolante: Completeness Assessment of Genome/Transcriptome Sequences
gVolante provides an online interface for completeness assessment of user’s original or publicly available sequence datasets as well as for browsing results of completeness assessment performed on publicly available genome and transcriptome assemblies.Tags: gVolante, Completeness, Assessment, Genome, Transcriptome, Sequences
1757 days ago
Comment on "Short-read assembly using Spades !"
..., the next step is to evaluate the quality of the assembled genome. This can be done using tools such as QUAST or BUSCO. These tools assess the completeness and accuracy of the assembled...439 days ago
3969 days ago