HS3D: Homo Sapiens Splice Sites Dataset
...ns extracted from GenBank Rel.123. The aim of this data set is to give standardized material to train and to assess the prediction accuracy of computational approaches for gene identific...1422 days ago
1436 days ago
RosettaAntibodyDesign (RAbD): A general framework for computational antibody design
RosettaAntibodyDesign (RAbD) is a generalized framework for the design of antibodies, in which a user can easily tailor the run to their project needs. The algor...1322 days ago
Applied Computational Genomics Course at UU: Spring 2020
...variation, and ChIP-seq and RNA-seq analysis. Students will learn and apply the fundamental data formats and analysis strategies that underlie computational genomics research. The p...1228 days ago
1224 days ago
Introduction to Bioinformatics and Computational Biology
This is the course material for STAT115/215 BIO/BST282 at Harvard University. Xiaole Shirley Liu (lead instructor)Joshua StarmerMartin HembergTing WangFeng Yue Ming Tang...1195 days ago
odgi: optimized dynamic genome/graph implementation
...sed with a variable length integer representation, resulting in a small in-memory footprint at the cost of packing and unpacking. The RAM and computational savings are substantial. In p...822 days ago
418 days ago
bacLIFE: an automated genome mining tool for identification of lifestyle associated genes
bacLIFE is a streamlined computational workflow that annotates bacterial genomes and performs large-scale comparative genomics to predict bacterial lifestyles and to pinpoint candidate...50 days ago