Nextflow: Data-driven computational pipelines
Nextflow enables scalable and reproducible scientific workflows using software containers. It allows the adaptation of pipelines written in the most common scripting lan...1549 days ago
QuartataWeb: user-friendly server developed for polypharmacological and chemogenomics analyses.
Data on protein-drug and protein-chemical interactions are rapidly accumulating in databases such as DrugBank ...s not necessarily mean the lack of interaction. Indeed, recent studies, both computati...1508 days ago
HS3D: Homo Sapiens Splice Sites Dataset
HS3D (Homo Sapiens Splice Sites Dataset) is a data set of Homo Sapiens Exon, Intron and Splice regions extracted from Ge...give standardized material to train and to assess the prediction accuracy of computati...1436 days ago
1451 days ago
RosettaAntibodyDesign (RAbD): A general framework for computational antibody design
RosettaAntibodyDesign (RAbD) is a generalized framework for the design of antibodies, in which a user can easily tailor the run to their project needs. The alg...1336 days ago
Applied Computational Genomics Course at UU: Spring 2020
This course will provide a comprehensive introduction to fundamental concepts and experimental approaches in the analysi...and apply the fundamental data formats and analysis strategies that underlie computati...1242 days ago
1238 days ago
Introduction to Bioinformatics and Computational Biology
This is the course material for STAT115/215 BIO/BST282 at Harvard University. Xiaole Shirley Liu (lead instructor)Joshua StarmerMartin HembergTing WangFeng Yue Ming Ta...1209 days ago
odgi: optimized dynamic genome/graph implementation
odgi provides an efficient and succinct dynamic DNA sequence graph model, as well as a host of algorithms that allo...small in-memory footprint at the cost of packing and unpacking. The RAM and computati...836 days ago
432 days ago