Results for "Computational Tools"
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Painless package development for R
Devtools makes package development a breeze: it wo...ions for code structure, adding efficient tools to support the cycle of package development. With devtools, developing a package becomes...u get started be sure to check out: devtools Google Group – htt...2918 days ago
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to a reference genome. Uniquely among current mapping tools, MOSAIK can align reads gener...2901 days ago
- gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno. http://gkno.me/how-to/install.html http://gkno.me/software.html
2901 days ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.
2899 days ago
- Database to Database Conversions db2db allows for conversions of identifiers from one database to other database identifiers or annotations. To use db2db select the...
2888 days ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly...ke, Mark Blaxter(submitted 2013-10-01 to Frontiers in Bioinformatics and Compu...
2877 days ago
- Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is cruc...ontally acquired genes. We then compared the method to existing HGT detection tools using a larger strain data se...
2868 days ago
Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to the frequently used tools for NGS analysis as well as g...ate NGS data as compared to the other command line tools such as grep, sed, perl etc....2868 days ago
- SAMtools: Primer / Tutorial by Ethan Cerami, Ph.D.keywords: samtools, next-gen, next-generation, sequencing, b...nbsp; Updated to use samtools 1.1 and bcftools 1.2. &n...p; Updated usage for bcftools.AboutSAMtools is a popular op...
2867 days ago
- Recent studies of the human genome have indicated that regulatory elements (e.g. promoters..., making sense of these datasets demands integrative and easy-to-use software tools. Moreover, network representa...
2863 days ago
