Results for "Computational Tools"

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  • Redundans

    Redundans pipeline assists an assembly of heterozygous genomes.Program takes as input&...te pairs, fosmids) modular: every step can be ommited or replaced by another tools...

    2813 days ago

  • GeneBreak: a tool to systematically identify genes recurrently affected by the genomic location of chromosomal CNA-associated breaks by a genome-wide approach

    Development of cancer is driven by somatic alterations, including numerical and structural chromosomal aberrations. Currently, several computational methods are available and are...ents in tumor genomes. However, there is lack of compu...

    2164 days ago

  • BBMap help

    BBMAP • a solution for everything That content has been reformatted and it is bein...kbp pieces and mapped independently. More at https://www.biostarhandbook.com/tools/bbmap/bbmap-help.html

    2774 days ago

  • VirMet

    Watch out: only a few files are counted in coverage statistics. Full documentation on Read the Docs. A set of tools for viral metagenomics. virm...

    2774 days ago

  • Shinyheatmap

    Background: Transcriptomics, metabolomics, metagenomics, and other various next-generation s...hallenges in biology, both in terms of available computational resources as well as programm...large input datasets (e.g., 100k+ rows) has been compu...

    2763 days ago

  • Graph Genome Suite

    Seven Bridges is the biomedical data analysis company accelerating breakthroughs in genomic...he Graph Genome Suite — the most advanced population genomics tools in the world.

    2756 days ago

  • ART: Set of Simulation Tools

    ART is a set of simulation tools to generate synthetic next-generation sequencin...sed to test or benchmark a variety of method or tools for next-generation sequencin...rs (e.g. VarSim) for evaluating variant calling tools or methods.

    2750 days ago

  • HybPiper

    HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are...s. HybPiper is a suite of Python scripts that wrap and connect bioinformatics tools in order to extract target se...

    2749 days ago

  • Spines

    Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute. It provides basic data structures for efficient data manip...

    2725 days ago

  • EAGER

    The automated reconstruction of genome sequences in ancient genome analysis is...a multifaceted process. EAGER encompasses both state-of-the-art tools for each step as well as new complementary tools tailored for ancient DNA data...

    2713 days ago