HTTDB - Horizontally transferred transposable elements database
Transposons or Transposable elements (TEs) are "mobile genes" capable of mobilization from one genomic location to another through non-homologous recombination. As th...2309 days ago
G-compass: a comparative genome browser
...genome alignments pursuing higher coverage (1,2). Annotations of human genes/transcripts and their ortholog information were derived from H-InvDB and its subdatabase ...2231 days ago
WhatsHap: fast and accurate read-based phasing
...t a phased VCF. Supports multi-sample VCFs. It produces standard-compliant VCF output by default If desired, get output that is compatible with ReadBackedPhasing Open Source (MIT...2185 days ago
SEX-DETector: A Probabilistic Approach to Study Sex Chromosomes in Non-Model Organisms
SEX-DETector is a probabilistic method that relies on RNAseq data from a cross (parents and progeny of each sex) to infer autosomal and sex-linked genes (genes locate...2182 days ago
2099 days ago
Wtdbg2: a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore
Wtdbg2 is a de novo sequence assembler for long noisy reads produced by Pac...or correction and then builds the consensus from intermediate assembly output. Wtdbg2 is able to assemble the hum...2041 days ago
2015 days ago
Biotite: A general framework for computational biology
...ve for the analysis of sequence and structural data analysis respectively, database downloads files from the other databases such as RCSB PDB, and application pr...1981 days ago
EyeChrom: Visualizing Chromosome Count Data From Plants
...the genus, and the plot will show the records found for it in the Chromosome Counts Database. note: Report an issue via Gihub: github.com/roszenil/CCDBcurator and github.com/Rodrigo...1960 days ago
1957 days ago