How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependenc...wrappers: moduleslibbio-samtools-perl - Perl interface to SamTools library for DNA sequenc...3964 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological da...he great biological programmer also read about the BioPerl packages, genomics, DNA string,...3964 days ago
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3964 days ago
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Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the GridION™ system and.... The platform technology uses nanopores to analyse single molecules including DNA/RNA and...3827 days ago
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Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows for easy implementation, i...s:Sequence analysis Sequence and Site objects, with various Alphabet support (DNA, RNA, P...3962 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides an...3961 days ago
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Prime Minister’s 100k Genome Project
Genomics Ebgland is destined to sequence 100,000 patients over the next five year in England. A landmark p...r in medical science advances to push the boundaries by unlocking the power of DNA data. T...3937 days ago
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Postdoctoral position in bioinformatics @ Sweden
Information about the department The Department of Mathematical Sciences at Chalmers...ods development for and analysis of next generation DNA sequencing, in particular com...arge-scale data, in particular from next generation DNA sequenc...3962 days ago
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Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a research field called bioinformatics...to analyze life. One is example is the genome. In all organisms, DNA contain...3931 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences #...= x['accession'] print("downloading", nm) dna = Entrez.efetch(db='nucleotid...').read().split("\n")[1:] allseq[nm] = ''.join(dna) imp...1150 days ago
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Comment on "Encode sequencing data freely available to download and use for academic means"
You can access the collected papers by exploring the thematic ENCODE threads with topics such as DNA methylation, RNA or machine learning. http://www.nature.com/encode/#/threads3719 days ago