Results for "DNA String"
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Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3961 days ago
- Bioinformatics is developing very rapidly. With new tools and software it is, now a days, easy to analyse the lar...e following fundamental topics in bioinformatics: assembling genomes, comparing DNA an...
3956 days ago
Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec) and k-...1158 days ago
What Junk DNA? It’s an Operating System
The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once referred to as “junk DNA,&r...3923 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NG...e.co.uk/blog/2009/04/basics-sequencing-dna-part-1/ http://www.genetic-i...e.co.uk/blog/2009/08/basics-sequencing-dna-part-2/ A window into third-...y and genotyping using next-generation DNA se...3499 days ago
Bioinformatics Algorithm Demonstrations and Tutorials
Abstract This project presents demonstrations of selected computer science algorit...erience. The algorithms demonstrated include two approaches to approximate string matching (dynamic programming...3716 days ago
Bioinformatics software for biologists in the genomics era
The genome sequencing revolution is approaching a landmark figure of 1000 completely sequenced genomes. Coupled with fast-declining, per-base sequencing costs, this influx of DNA se...3798 days ago
Encode sequencing data freely available to download and use for academic means
In Encode, regulatory elements investigated via DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that interact with DNA, i...3717 days ago
- RNA Seq Basic Galaxy Tutorial RNA-Seq tutorial based on Trapnell et al. (2012)...ng small variants (SNVs and indels) in human genomic DNA using a small set of reads fr...thod to analyze the interaction between proteins and DNA....
3664 days ago
Managing and Analyzing Next-Generation Sequence Data
Centralized Bioinformatics Core Facilities provide shared resources for the computational and IT requirements of...y faced with an unprecedented flood of data generated by the next generation of DNA se...3650 days ago
