3841 days ago
Public Databases for Bioinformatics !
...durga: Montgomery and sensitive data 24 intel cores 256GB RAM 5...papers, and other highly processed data here /mnt/data/ globally...return def write( self, data ): self.lock.acquire...For use case 3 we used the ENCODE datasets https://www.encodepr...1132 days ago
Bioinformatics software for biologists in the genomics era
...ng costs, this influx of DNA sequence data has encouraged laboratory scientists to engage large datasets in comparative sequence a...needs of biologists to analyze large datasets by using sophisticated co...ogrammers when analyzing genome scale datasets.3779 days ago
Encode sequencing data freely available to download and use for academic means
In Encode, regulatory elements investigated via DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that...3698 days ago
3645 days ago
Managing and Analyzing Next-Generation Sequence Data
...f experimental technology. Recently faced with an unprecedented flood of data generated by the next generat...y components, including infrastructure upgrades, staffing, and tools for data analyses and management ......3631 days ago
Orione – a web-based framework for NGS analysis in microbiology
End-to-end NGS microbiology data analysis requires a diversity of tools covering...ex, reproducible workflows for NGS microbiology data analysis. Enabling microbiolo...rchers to conduct their own custom analysis and data manipulation without software...3567 days ago
Integrative Genomics Viewer (IGV) tutorial
...s Viewer (IGV) from the Broad Center allows you to view several types of data files involved in any NGS analysis that employs a reference genome, including how reads from a dataset are mapped, gene annotatio...3577 days ago
COSMOS, our workflow management system for NGS data
...based management system for implementing large-scale parallel workflows focusing on, but not restricted to, large-scale short-read "NGS" sequencing data is open-access published via...3567 days ago
3507 days ago