GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://...r correction, for which a highly sensitive overlapper is required.Currently, development of a new spliced-alignment mo...2534 days ago
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite that allows users to analyse data p...re can be easily wrapped in the workflow framework (cp. Section 'Module Development: Adding new..') and data from...2506 days ago
MOSS: A System for Detecting Software Similarity
Moss (for a Measure Of Software Similarity) is an automatic system for determining th...n of Moss has been in detecting plagiarism in programming classes. Since its development in 1994, Moss has been very e...2349 days ago
RNAcon: web-server for the prediction and classification of non-coding RNAs
RNAcon is a web-server for the prediction and classification of non-coding RNAs. It u...classes. The structural information based graph properties were used for the development of prediction model. The&nbs...2494 days ago
CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
Local sequence alignment is a cornerstone of bioinformatics, allowing to compare the...ckages. However, with the advent of Next Generation Sequencing (NGS) and the development of new sequencing techniques,...2486 days ago
2485 days ago
miniasm: very fast OLC-based de novo assembler for noisy long reads
Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It...se error rate is similar to the raw input reads. So far miniasm is in early development stage. It has only been teste...2361 days ago
MetaSim A Sequencing Simulator for Genomics and Metagenomics.
Our software can be used to generate collections of synthetic reads that reflect the diverse taxonomical composition of typical metagenome data sets. Based on a database of...2354 days ago
Mash: fast genome and metagenome distance estimation using MinHash
Mash is normally distributed as a dependency-free binary for Linux or OSX (see h...es). This source distribution is intended for other operating systems or for development. Mash requires c++11 to build...2345 days ago
1393 days ago