Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to understand the different processes inside a...ioCyc pathways (collection of 5500 pathway/genome databases) http://www.biocyc.org/ Pa...sp; Integrated environment composed of a central database an...2296 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools includ...A to B relationship Has own database-- “knowledge base&rdquo...genome builds and annotation databases Performs base trimming, ali...TK and BWA and a SNP (dbSNP!) database is required Input: FASTQ Ou...2917 days ago
Worldwide funding agencies to fund your bioinformatics research !!
...search conferences and career development grants. The Cystic Fibros...ene therapy, neurobiology and development of the basal ganglia, cell su...nt Resource Center includes a database "customized to smaller instituti...dely used funding opportunity database in the world. An institutional s...2946 days ago
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Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation GeneSCF ser...GeneSCF supports more organisms from V1.1. Examples to download database as simple text file using GeneSCF "prepare_database" m...2880 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads and a file of qualit...es persistence to such objects through relational databases that at least partially correspond the Clotho data model. Beyond database ac...2694 days ago
Awesome perl frameworks, libraries and software - PART 1
...bsp;- DuckDuckHack OpenSource Development Application CaptTofu/DBD-...sp;- Perl module representing database URIs semifor/twirc - Twitt...rsion for scientific software development khrt/Raisin - Raisin -...perl - Create MaxMind DB database files mattn/p5-Growl-Any -...2498 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated from two d.... From the Greek word "klados", meaning branch or twig. cladogenesis -- The development of a new clade; the splitting...2471 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignm...of short reads based on a comprehensive sequence database Software (C++) https://ccb....s to reads by k-mers searches in precomputed database S...2380 days ago