Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads |...rdpress.com/2017/06/01/example-gallery-of-nanoplot/ Tool documentation https://broadi...p://seqanswers.com/forums/showthread.php?t=26721 samtools(1) manual page http://www.h...2255 days ago
Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for furth...number of in silico tools have been employed for the t...ptimized methods of combining tool scores, such as Condel and Lo...f new variants. Study of 10 tools on five datasets that such a...letion (CADD)“CADD is a tool for scoring the deleteriousne...2217 days ago
Protein-Protein Interaction Sites Predictions !
The study of Protein–Protein Interactions (PPIs) has a c...ical observations. Following are the list of tools commonly used to PPIs predic...ns for proteins with known 3D structure. PFplus A tool for extracting and displaying...2216 days ago
Gap filling or Contigs extensions tools !
There are many tools to perform gap filling using Illumi...with GapFiller". There are also some tools like GAPresolution that can...//www.baseclear.com/landingpages/basetools-a-wide-range-of-bioinformati...particular, take a look at the IMAGE tool: http://genomebiology.com/201...2178 days ago
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Bioinformatics in Africa:- Part 1
The Institut Pasteur de Côte d’Ivoire was created by the N°72511 law...s to use bioinformatics as an indispensable tool to research. &bull...1203 days ago
Short-read assembly using Spades !
If we only had Illumina reads, we could also assemble these using the tool Spades. You can try this here, or try...838 days ago
Bioinformatics tools for genome assembly !
There are numerous genome assembly tools available, each with its strengt...some widely used genome assembly tools as of my last update in Sept...tantly evolving, and new assembly tools may have emerged since my la...mbled. When selecting an assembly tool, consider the specific requir...300 days ago
Steps to find all the repeats in the genome !
To find repeats in a genome from 2 to 9 length using a Perl script, you can use the RepeatMasker tool with the "--length" option[0]...o extract the information you need. There is a Perl tool called "one_code_to_find_them...262 days ago