Results for "Discovery studio"
Bookmarks
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NGS workshop tutorial at http://chagall.me...ation Sequence 10.1186/1471-2164-12-285 A framework for variation discov...3487 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
In recent years, computational biology and medical informatics have seen significant advan...search and clustering, function prediction, motif discovery, functional site recognition...alysis, population simulation, haplotyping, marker discov...3499 days ago
- First step: Install & load “VennDiagram” package. # install.packages('VennDiagram') library(VennDiagram) Second step: Load data Add filepath if “catdoge.csv” is not in working-directory. d <- read.csv("catdoge.csv")
2932 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
This tutorial covers topics independently of HOMER, and represents knowledge which is important to know before diving...files Visualizing data in a genome browser RNA-Seq De novo transcript discov...2931 days ago
mrFAST: Micro Read Fast Alignment Search Tool
mrFAST is a read mapper that is designed to map short reads to reference genome with a special emphasis on the discov...2931 days ago
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
MOSAIK is a stable, sensitive and open-source program for mapping second and third-generat...growing interest in larger structural variant (SV) discovery, MOSAIK provides explicit sup...s well as generating outputs tailored to aid in SV discov...2907 days ago
- Genome STRiP (Genome STRucture In Populations) is a suite of tools for discovering and genotyping structural var...ower across genomes and processing more genomes provide better results.To run discov...
2798 days ago
- A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chiang, Aaron R Quinlan, and Ira M Hall. 2014. "LUMPY: a Probabilistic Framework for Structural Variant Discov...
2810 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome correspondence. The algorithms enabled the automatic ide...ion and in that way differ from the current literature on computational motif discov...2734 days ago
- ART is a set of simulation tools to generate synthetic next-generation sequencing reads. ART simulates sequencing rea...ysis, including read alignment, de novo assembly, SNP and structure variation discov...
2740 days ago
