Biotite: A general framework for computational biology
The package is open source and freely available at GitHub (https://github.com/biotite-dev/biotite). This package is simple to use especially for the beginners in programming and computationally efficient...1964 days ago
LTR_Finder: an efficient program for finding full-length LTR retrotranspsons in genome sequences.
...Next, LTR_FINDER tries to identify PBS, PPT and RT inside LTR pairs by build-in aligning and counting modules. RT identification includes a dynamic programming to process frame shift. For o...1937 days ago
Shouji: a fast and efficient pre-alignment filter for sequence alignment
...nbsp; We introduce Shouji, a highly parallel and accurate pre-alignment filter that remarkably reduces the need for computationally-costly dynamic programming algorithms. The first key ide...1642 days ago
Bioinformatics web development course
This web development course, targeted at Biology and Bioi...web applications for Bioinformatics. No previous programming knowledge is assumed. By foll...torial you will learn the fundamental concepts of programming by using scripting languages:...1640 days ago
Seq: A high-performance, Pythonic language for bioinformatics
Seq is a programming language for computational genomics and bioinformatics. With a Python-compatible syntax and a host of domain-specific features and optimizations, Seq...1623 days ago
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SeQuiLa-cov: A fast and scalable library for depth of coverage calculations
The Docker image is available at https://hub.docker.com/r/biodatageeks/. Supplem...om/ZSI-Bio/bdg-sequila • Operating system: Platform independent • Programming language: Scala • Other...1601 days ago
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Google Colab : Google Colab is a free cloud service and now it supports free GPU!
You can: improve your Python programming language coding skills. develop deep learning applications using popular libraries such as Keras, TensorFlow, PyTorch, and OpenCV. If...1554 days ago