Results for "Environment"
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...ncbi.nlm.nih.gov/pubmed/19815776). There are two options to run ShRec3D (on linuX only so far): the first one uses the Matlab complier runtime environment (MCR), the second one doesn't...3430 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
...nts knowledge which is important to know before diving head first into more advanced analysis tools such as HOMER. Setting up your computing environment Retrieving and storing seque...2943 days ago
- ...vel, self-contained technique named Near HGT, based on the synteny index, to measure the divergence of a gene from its native genomic environment and used it to identify candi...
2886 days ago
- ...git gcc 4.2 or newer python 2.7 wget 64bit processor and build environment 150GB+ of memory on at least...to add the location of progressiveCactus/bin to your PATH environment variable. In order to run the...
2677 days ago
- ...e results of these comparative analyses are also displayed in the 3D environment of Sockeye. By using the Java3D API to visualize genomic data in a 3D environment, we are able to compactly dis...
2646 days ago
NCBI Prokaryotic Genome Annotation Pipeline
...hapter. NCBI's annotation pipeline depends on several internal databases and is not currently available for download or use outside of the NCBI environment. https://www.ncbi.nlm.nih.go...2558 days ago
Perlbrew: admin-free perl installation management tool.
...nit needs to be executed. The default perlbrew root directory is ~/perl5/perlbrew, which can be changed by setting PERLBREW_ROOTenvironment variable before the installat...2501 days ago
Mobyle: a new full web bioinformatics framework
Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embeds simple yet powerful data management features that allow the user to...2321 days ago
Snakemake—a scalable bioinformatics workflow engine
Snakemake is a workflow engine that provides a readable Python-based workflow definition language and a powerful execution environment that scales from single-core workstations to compute clusters without modifying the workflow.2083 days ago
- ...tion of new technologies with applications to medicine; agriculture; environment; and industry. Our capacity...IVITIES INCLUDE: Biomedical Genetics: investigating genetic and environmental factors contributing to phe...
2081 days ago
