3962 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...gy 29:644 - 652, 2011. PubMed [The software is called Trinity, and is available on Sourceforge.] Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transc...3794 days ago
List of bioinformatics open source projects/software.
...iverse genomic data IntAct http://www.ebi.ac.uk/intact/ molecular interaction database InterMine http://intermine.github.io/intermine.org/ Extensive data warehouse system for the...3771 days ago
Commercial and public next-gen-seq (NGS) software
...S2). Particularly designed for Illumina with preliminary functions to handle ABI SOLiD data. Written by Heng Li from the Sanger Centre. Features extensive supporting tools for DIP/SNP...3533 days ago
A guide for complete R beginners !
...s that biologists need to perform some basic analysis: load a table, plot some graphs, and perform some basic statistics. More extensive tutorials can be found on the...3376 days ago
Software packages for next gen sequence analysis
...S2). Particularly designed for Illumina with preliminary functions to handle ABI SOLiD data. Written by Heng Li from the Sanger Centre. Features extensive supporting tools for DIP/SNP...3257 days ago
Comprehensive list of visualization tools for biological pathways
...//www.g-language.org/PathwayProjector/ PATIKA Integrated environment composed of a central database and a visual editor, built around an extensive ontology and an integration f...2301 days ago
Genome Assembly Tools and Software - PART1 !!
...he highest quality read segments rather than a consensus, it provides extensive assembly information to assis...> 200 bp) currently widely-used in metagenome projects. Results of extensive tests on simulated data show...2700 days ago