Results for "GC"

Bio-Scripts

  • Basic docker commands !

    ...> 0974217c0b0e Step 6/12 : RUN apt-get install --yes build-essential gcc-multilib perl ---> Using...Network: bridge host ipvlan macvlan null overlay Log: awslogs fluentd gcplogs gelf journald json-file...

    1506 days ago

  • Setting up autoConTAMPR !

    ...t install --yes git && apt-get install -y wget ---> Using cache ---> 646453255081 Step 6/16 : RUN apt-get install --yes build-essential gcc-multilib perl ---> Using...

    1439 days ago

  • get GC across the entire CDS !

    #look at GC across the entire CDS. gffread -x - -g | \ seqtk comp - | \ awk -v OFS="\t" '{ print $1, "0", $2, ($4 + $5) / $2 }'

    1390 days ago

  • Install grabseqs with conda !

    (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1213 days ago

  • Install prokka using conda !

    (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen...

    1212 days ago

  • Genome assembly Treasure Hunt

    ...e assemble it. If you are brave enough, you can try to assemble this set of reads: CAGATGTCCT GACCTTTTCT TAAGATCTTT TCTTTAGCCG TTTCTTCTTT GAGCTTTACT TTACTTCATT TCATTC...

    1212 days ago

  • Install gffread using Conda !

    ...---------------------|----------------- _libgcc_mutex-0.1 |...h8b12597_0 635 KB bioconda libgcc-ng-9.1.0 |...#################################### | 100% _libgcc_mutex-0.1 | 3 KB | #...

    1200 days ago

  • Set up WGD environment using conda !

    #Wgd cannot be installed directly with bioconda at present, so it is slightly troublesome to install, because it #depends on a lot of software. wgd depends on the fol...

    1200 days ago

  • Install ATOM editor on Elemantory OS / Ubuntu

    ...ing additional packages will be installed: gconf-service gconf-service-backend gconf2-com...chive.ubuntu.com/ubuntu bionic/universe amd64 gconf-service-backend amd64 3.2.....6-4ubuntu1) ... Creating config file /etc/gconf/2/path with new version S...

    1172 days ago

  • install gap2seq using conda !

    vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda/label/cf201901 gap2seq Collecting package metadata (current_repodata.json): done S...

    1051 days ago