3014 days ago
Ensembl comparative genomics resources
...s by other projects including Ensembl Genomes and Gramene and much of the information here is relevant to these projects. The consistency of the annotation across species and the focus...3005 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
...Basic analysis of Affymetrix Gene Expression Arrays using R/Bioconductor General Tips for Data Analysis Excel workarounds, adding gene annotation, X-Y plots tips, etc....2948 days ago
MEDEA: Comparative Genomic Visualization with Adobe Flash
...n visual system to detect trends and spot outliers is necessary in such large and complex data sets. More at http://www.broadinstitute.org/annotation/medea/2947 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate ba...hat enables researchers to build custom annotation pipelines. RASTtk offers a ch...he ability to add custom features to an annotation job. RASTtk also accommodates...2946 days ago
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