Results for "Gene Enrichments"
Top-level pages
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to understand the diff...types are metabolic pathways, gene regulatory pathways, and sign...ding, visualizing and sharing gene regulatory network models ove...ml GenMAPP Visualization of gene expression and other genomic...d pathways and reactions from gene lists...2287 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools in...ntegrates microarray and next generation sequencing data Go...al-based prior p(genotype) to generate posterior probabilities...end using GATK or samtools to generate) Output: out_vcf UN...e version gives comprehensive genetic rep...2909 days ago
Worldwide funding agencies to fund your bioinformatics research !!
Are you seeking funding for research or training in a particular area? C...to research students in the areas of general and applied science. BD B...onsider one of these prestigious (and generous) endowments. Whitaker In...ientific knowledge and train the next generation...2938 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discov...nome.Interspersed RepeatsProcessed Pseudogenes, Retrotranscripts, SINES - Non-functional copies of RNA genes which have been reintegrated..."able was I ere I saw elba")—with genetic pal...2211 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation GeneSCF serves as command line tool for clustering the list of genes given by the users based on f...ene list in the form of Entrez Gene ID (UIDs) or Official gene sy... The advantage of using GeneSCF ove...2872 days ago
- Bash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9 &...29/sample.GTF) file to annotation table format. It generated two files1) Transcript w...ae57fc8b4a14c7f4/sample.GTF_enst_annotation.txt)2) Gene wise c...
2106 days ago
- alignment: the mapping of a raw sequence read to a location within a ref...quality scores for each base; usually generated by sequencing machines....structural rearrangements, including gene fusions. Phred-scaled probab...rangements. See also BCF format. NextGenerationS...
2869 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence re...d Read LinkAge COCACOLA: a general framework for binning cont...many functionalities, and can generate much longer repeats than...REconstruct 16S ribosomal RNA Genes from MetagenOmic data an...interpretation and hypothesis generation....2686 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and softwar...tain modules that are of more general use and even classes that...d to only one of all possible gene isoforms miyagawa/web-scrape...erface to 0MQ2 trizen/obmenu-generator - A fast menu gener...lection of utilities for Next-Generation...2489 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have...meaning branch or twig. cladogenesis -- The development of a ne...a descended from a major cladogenesis event, recognized by posse...group is said to be extinct. genetic marker -- A DNA sequence t...a family includes one or more genera, and...2462 days ago
