Phylogenetic & Molecular Genetics Terms and Definitions
...nger RNA template ( Messenger RNA contains the coded information for protein synthes...r taxon die, the group is said to be extinct. genetic marker -- A DNA sequence that...changes in character states is the best. phylogenetics -- Field of biology that...2463 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
.../AAF kSNP v3 Reference-free SNP identification and estimation of phylogenetic trees using SNPs (based on&nb...metatranscriptomic samples from NGS reads Software (Python/R) https://code.google.com/p/d2-tools/ VirHo...2372 days ago
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Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of th...ive ways, and the project has produced a lot of new code that does old things in bette...emove all but the most complicated of SQL from your code, leaving you to manipulate yo...2323 days ago
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List of visualization tools for genome alignments
Genome browsers are useful not only for showing final results but also for improving analysis protocols, testin...t MagicViewer Visualization of short read alignment, identification of gene...2285 days ago
Awk for Bioinformatician and computational biologist
Awk is a programming language which allows easy manipulation of structured data and is...rint CONDITION ? PRINT_IF_TRUE_TEXT : PRINT_IF_FALSE_TEXT. For example, in the code below, we identify sequences...2281 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material between two organisms” , is relatively common in proka...must not experience strong negative selection, despite potential for gene...851 days ago
Python learning resources for bioinformatics and computational biologist !
Python is a general-purpose language, which m...resources at https://github.com/CodementorIO/Python-Learning-Resou...ng Skills in Python (PDF) (2.6) Code Like a Pythonista: Idiomatic...n - David Mertz (2.3 - 2.x) The Coder's Apprentice: Learning Progr...2256 days ago