Results for "Genetic Code"
Top-level pages
IUPAC codes DNA: Nucleotide Code: Base: ---------------- ----- A.................Adenine C...............N.................any base . or -............gap Protein: Amino Acid Code: Three letter Code: Amino Aci...2246 days ago
Creating conda environment for python2.7
TIP: By default, environments are installed into the envs directory in your conda directory. Run conda create --help for information on s...2191 days ago
Learning Python Programming - a bioinformatician perspective !
Python Programming is a general purpose programming la...need to be compiled. Interpreter parses the program code and generates the output. Py...he developers need to cast the type manually. Less code and more use makes it more ac...2184 days ago
Understanding BLASTn output format 6 !
BLASTn output format 6 BLASTn maps DNA against DNA, for example gene sequences against a reference genomeblastn -query genes.ffn -subject genome.fna ...2140 days ago
My commonly used commands in Bioinformatics
FYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually: minimap -t 24 assembly.fasta long_reads...2111 days ago
Parallel Processing with Perl !
Here is a small tutorial on how to make best use of multipl...p;push (@childs,$fork); }elseif($fork==0){your code here;exit(0);}else{die &ldquo...creates a child process and takes the variables and code with it to analyze it separat...2081 days ago
- The benchmark module is a great tool to know the time the code takes to run. The output is usu...s us with a way to optimize our code. With the advent of petascale..._time = Benchmark->new; our code…… $second_time...time taken by some part of the code in the program. More sophi...
2081 days ago
- It's been a while since I last instal...s now version 35 and that the code to download was: blatSrc...ecided to download the source code and compile that.I will be co...le that comes with the source code.One thing about building blat...or all architectures.The BLAT code assumes that you are compilin...
2064 days ago
- Follow this: Settings file Error Your web server does not have permission...r-user-id/public_html/elgg/elgg.1.8.0.1/ The directory where you put the Elgg code (Elgg usually guesses this co...
893 days ago
Short-read assembly using Spades !
If we only had Illumina reads, we could also assemble these using the tool Spades. You can try this here, or try it later on your own data. Get data We will use the...826 days ago
