Results for "Genetic and Biology"
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CSBB is a command line based bioinformatics suite to analyze biolo...ed in Perl, while it also leverages the use of R and python in background for spec...ules. Major focus of CSBB is to allow users from biology and bioinformatics community, to get...2879 days ago
- OrganellarGenomeDRAW is dedicated to convert genetic information stored in GenBank entries to graphical maps. The input tex...n be chosen among several formats. The application is especially optimized and ada...
2831 days ago
- A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chiang, Aaron R Quinlan, and Ira M Hall. 2014. "LUMPY: a P...Framework for Structural Variant Discovery." Genome Biology 15 (6): R84. doi:10.1186...
2822 days ago
OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assemb...mate-pair/long reads to order and orient the intermediate conti...ors, improve efficiency etc.) and incorporated features that ar...ore encourage you to download and use our latest version: OPERA...s is available at Genome Biology. We look forward to getting y...2807 days ago
CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is...y genome maps for use in publications and websites, or as a visualizati...with the genome using a powerful pan-and-zoom interface, or GView can...to provide greater user interaction, and mor...2797 days ago
- Strudel is our graphical tool for visualizing genetic and physical maps of genomes for comparative purpos...lution, from entire maps to individual markers, and explore syntenic relationships between genomes. All browsing and int...
2786 days ago
- Background: Transcriptomics, metabolomics, metagenomics, and other various next-generation...red grid of cells, efficiency and speed have often proven to be...ble on both desktop computers and web browsers. In addition to...methods are implemented in R, and are available as part of the shin...
2765 days ago
- Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute. It provides basic data...all-purpose alignment tool for less diverged sequences; and SLAP, a context-sensiti...
2727 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/comm...gdon/ps/conference/super_biokdd.pdf https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/lecture-slides/MI...2713 days ago
- ...uite of core-genome alignment and visualization tools for quickly analyzing thousands of intraspecific microbial g...lls, recombination detection, and phylogenetic trees. Tools Parsnp...fic microbial genomes. Genome Biology, 15 (11), 1-15 [PDF]...
2663 days ago
