Comprehensive list of visualization tools for biological pathways
...eractive Kyoto Encyclopedia of Genes and Genomes pathways http://www.genome.jp/kegg/ Omix Visuali...thwayexplorer_description.shtml Pathway projector Zoomable pathway bro...ps API http://www.g-language.org/PathwayProjector/ PATIKA Integrated...2287 days ago
2714 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...Accepts VCF files from 1000 Genomes Project Accepts downloaded tracks f...umina reads from 1001 genomes project (uses ref plant- 1001genomes....SnpEff Input: BAM Reference Genome: FASTA indexed with SAMtools f...cted in dpSNP or 1000 Genomes Project; Very popular *“The fin...2909 days ago
Worldwide funding agencies to fund your bioinformatics research !!
...rgeous parks and trails pitch projects to this governing body, conc...ific research and development projects that meet federal R&D ob...cohol Research contributes to projects studying how alcohol impacts...Foundation supports research projects in any patient care specialt...2938 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain stretches of highly repetitive...ave been copied to another region of the genome.Interspersed RepeatsProcessed...es which have been reintegrated into the genome...2211 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation &n...kandurilab.org/documentation.php Report issues on Biostars or GitHub Project page ----------2871 days ago
2869 days ago
Genome Assembly Tools and Software - PART1 !!
...reported for the assembly of genomes while the others are designed aiming at handling complex genomes. TriMetAss 1.2 – Th...tly widely-used in metagenome projects. Results of extensive tests...Phusion 2.1c – Assembly Genome Sequences from Whole Genome Sh...2685 days ago
Quick next generation sequencing (NGS) terms definition
fragment size: the Illumina WGS protocol generates paired-end reads from both ends...concordant if they can be mapped to the reference genome as “expected”: (a...sp;a read that can only be mapped to the reference genome...2522 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and...sending email kruser/atbat-mongodb - A Perl project that pulls data from MLB's At...om Web do-know/Crypt-LE - Crypt::LE (ZeroSSL project) - Let's Encrypt client and l...2489 days ago