Results for "Genome Project"
Top-level pages
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material betw...NA must enter the host nucleus, integrate into the genome, and in more complex organism...otential for genetic incompatibility with the host genome...850 days ago
Python learning resources for bioinformatics and computational biologist !
Python is a general-purpose language, which means it can be used to build just about...erflow documentation (3.x) Python Practice Book (2.7.1) Python Practice Projects Python Programming (PD...2255 days ago
Some useful Bioinformatics links
...ed on the FMD-index for large genomes https://github.com/lh3/ferm...oter_tutorial//Tutorial/CustomGenomes/CustomGenomes.html https://...oho.eu/signin?servicename=ZohoProjects&serviceurl=https%3A%2F%2Fprojects.zoho.eu%2Fportal%2Favaga2 lh...2242 days ago
Installing Bio::SCF perl module
Most Perl modules are written in Perl, some use XS (they are written in&nbs...(staden.sourceforge.net). This can be downloaded from https://sourceforge.net/project/showfiles.php?group_id=100316...2218 days ago
Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for further experimental investigation is a key challenge in current sequencing stud...ingle‐nucleotide variants as well as insertion/deletions variants in the human genome&...2203 days ago
- $ sudo apt-get install python-numpy python-scipy python-matplotlib ipython ipython-note...##[Mon May 7 11:29:18 2018] Reduction...#file name genome size contigs heterozygous siz...May 7 11:29:35 2018] Final reduction...#file name genome...
2190 days ago
Gap filling or Contigs extensions tools !
There are many tools to perform gap filling using Illumina short reads, fo...aired reads" or "Toward almost closed genomes with GapFiller". There are a...take a look at the IMAGE tool: http://genomebiology.com/2010/11/4/R41...n't interested in assembling the full genome,...2165 days ago
Understanding BLASTn output format 6 !
BLASTn output format 6 BLASTn maps DNA against DNA, for example gene sequences against a reference genomeblastn -query genes.ffn -subject genome.fna -outfmt 6 BLASTn tabula... 2. sseqid subject (e.g., reference genome)...2139 days ago
List of non-commercial NGS genotype-calling software
Meaningful analysis of next-generation sequencing (NGS) data, which are produced extens...tp://www.broadinstitute.org/gsa/wiki/index.php/The_Genome_Analysis_Toolkit Multi-sample...r.ac.uk/resources/software/margarita) MaCH http://genome....2096 days ago
Bioinformatics in Africa:- Part 1
The Institut Pasteur de Côte d’Ivoire was created by the N°72511 l...training in bioinformatics and genome data analysis. Sho...7 a yearly regional course of initiation and using genome...1190 days ago
