Results for "Genomic Medicine"
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RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R and could be easily integra...ng and graphic manipulation pipelines for presenting large-scale multi-sample genomic...2913 days ago
- Stampy is a package for the mapping of short reads from illumina sequencing machines onto a reference genome. It's recommended for most workflows, including those for genomic...
2912 days ago
CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a range of...present Cnidaria, a practical tool for clustering genomic and transcriptomic data with...nces. We successfully simultaneously clustered 169 genomic...2885 days ago
- Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is crucial for genetic innovati...n the synteny index, to measure the divergence of a gene from its native genomic...
2880 days ago
- Recent studies of the human genome have indicated that regulatory e...ters and enhancers) at distal genomic locations can interact with e...ffect gene expression levels. Genomic technologies for mapping inte...g diversity and complexity of genomic information and public ontolo...
2875 days ago
- Records in 4DGenome are compiled through comprehensive literature curation of experimentally-derived and computatio...are freely available in a standardized file format. Records can be queried by genomic...
2868 days ago
- RepeatModeler is a de-novo repeat family identification and modeling package. At the heart of RepeatModeler are two...RepeatModeler assists in automating the runs of RECON and RepeatScout given a genomic...
2823 days ago
- We advise to run first the TEdenovo pipeline but it is not compulsory. We suppose you begin by running the TEannot pipeline on the example provided in the directory "db/" rather than directly on your own genomic sequences. Thus, from now on, the project name is "DmelChr4".
2823 days ago
Sushi: An R/Bioconductor package for visualizing genomic data
Sushi: An R/Bioconductor package for visualizing genomic data2810 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome correspondence. The algorit...recent gene family expansions in regions of rapid genomic change. We present methods f...Our results demonstrate the power of comparative genomics...2739 days ago
