Worldwide funding agencies to fund your bioinformatics research !!
Are you seeking funding for research or training in a particular area? Check out the following agencies ... National Science Foundation: For the love of scien...2951 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain stretches of highly repetitive DNA sequences ( see Reassocia...2224 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
...ed on Ubuntu, Mint and Cent OS. Other distributions of Linux might work as well. Documentation:http://genescf.kandurilab.org/documentation.php Report issues on Bi...2885 days ago
2882 days ago
Genome Assembly Tools and Software - PART1 !!
...ality-value file for the high throughput short reads is usually high...enience of data inquiry, high-throughput short reads data is always...s assembly algorithm for high-throughput sequencing reads.System req...a hybrid assembly using high throughput short and long reads R...2699 days ago
Awesome perl frameworks, libraries and software - PART 1
...compilable, company friendly, security kbh3rd/shptosvg - Shapefile to SVG...-performance - C++ vs. Python vs. Perl vs. PHP vs. Java vs. NodeJS vs. Go vs...h smart cards and PC/SC liyanage/build-entropy-php - The Perl-based build s...2502 days ago
Run miniasm assembler on nanopore reads !
Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and out...2343 days ago
BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
BBSplit internally uses BBMap to map reads to multiple genomes at once, and determine which genome they match best. This is different than with ordinary mapping. If a...2327 days ago
List of visualization tools for network biology
...etwork management http://sbi.imim.es/web/BIANA.php BioLayout Express 3D ...in-protein interactions from BIND, BioGRID, DIP, HPRD, IntAct and MINT http://bi...tion of data such as genomic context, high-throughput experiments, conserved coex...2301 days ago
Computational resources for TE discovery and TE detection
...pment/blaster/ Censor http://www.girinst.org/censor/download.php find_ltr http://d...st.wustl.edu/maskeraid/ mer-engine http://mer-engine.cshl.edu/mer-home.php mreps http://bioinfo.lifl.f...2287 days ago