Results for "HPC"
Blogs
List of bioinformatics workflow management tools !
...portable and scalable across a variety of software and hardware environments, from workstations to cluster, cloud, and high performance computing (HPC) environments. [ web&nbs...1155 days ago
Basic Structure of Snakemake Pipeline Run !
...json = json format file with extra parameters for our snakemake file to use. cluster.json = json format file with specification for running on the HPC samples.txt = file we will u...947 days ago
- +1 more Blogs
Bookmarks
Latest paper on comparison of mapping tools
...Toland, U. V. Catalyurek "Benchmarking short sequence mapping tools" BMC Bioinformatics, 14(1):184, 2013. http://bmi.osu.edu/hpc/software/benchmark/ http://bmi.osu.edu/hpc/software/pmap/pmap.html Othe...3909 days ago
- ...ith life scientists in Switzerland and beyond. The multi-disciplinary team provides expertise, training and maintains a high-performance computing (HPC) and storage infrastructure,...
3439 days ago
- +1 more Bookmarks
Opportunity posts
Bioinformatic/computational postdoc at South Dakota State University
...perform computational analysis of high throughput, next-generation sequence data and possess the ability to use bioinformatics analytical tools on HPC clusters. Required Qual...3720 days ago
Protein function annotation and machine learning - UPMC - Paris, France
...ata as well as sophisticated machine learning techniques and combinatorial optimization approaches taking advantages of High Performance Computing (HPC) environments. The idea is to...3577 days ago
- +5 more Opportunity posts
Tags
- EasyBuild is a software build and installation framework that allows you to manage (scientific) software on High Performance Computing (HPC) systems in an efficient way.A full list of supported software packages is available here.
Tags: Bioinformatics, Tool, Installation, Compile, HPC, Software, EasyBuild
2668 days ago
Comments
- ...n genome. It is quite a complex beast that has HPC integration built in - though...assembly jobs are best run in parallel, making HPC integration essential. This c...estimate the genome size, tell canu NOT to use HPC (as we don’t have one f...
2188 days ago
