List of bioinformatics workflow management tools !
...portable and scalable across a variety of software and hardware environments, from workstations to cluster, cloud, and high performance computing (HPC) environments. [ web&nbs...1160 days ago
Basic Structure of Snakemake Pipeline Run !
...json = json format file with extra parameters for our snakemake file to use. cluster.json = json format file with specification for running on the HPC samples.txt = file we will u...952 days ago
Latest paper on comparison of mapping tools
...Toland, U. V. Catalyurek "Benchmarking short sequence mapping tools" BMC Bioinformatics, 14(1):184, 2013. http://bmi.osu.edu/hpc/software/benchmark/ http://bmi.osu.edu/hpc/software/pmap/pmap.html Othe...3915 days ago
3444 days ago
Bioinformatic/computational postdoc at South Dakota State University
...perform computational analysis of high throughput, next-generation sequence data and possess the ability to use bioinformatics analytical tools on HPC clusters. Required Qual...3725 days ago
Protein function annotation and machine learning - UPMC - Paris, France
...ata as well as sophisticated machine learning techniques and combinatorial optimization approaches taking advantages of High Performance Computing (HPC) environments. The idea is to...3582 days ago
2193 days ago