Dynamic chromosome breakpoints !!!
... Apart from certain chromosome abnormalities, these “crossing over” of segments of maternal and paternal chromosomes to form hybrid chromosomes have some evoluti...3546 days ago
Ancient whole genome duplication (WGD) detection tools !
...e: KDE fitting to the Ks distribution ksd: Ks distribution construction mcl: BLASP comparison of All-vs-ALl + MCL classification analysis. mix: Hybrid modeling of Ks distribution....1149 days ago
2614 days ago
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3915 days ago
Genome Assembly Tools and Software - PART2 !!
...assembler or scaffolder, and is designed to run in a cluster environment facilitating high-throughput processing of genomes. MAXIMUS 0.2 – Hybrid Reference and de novo Assembl...2680 days ago
3941 days ago
Commercial and public next-gen-seq (NGS) software
...tware for additional analysis and visualization capabilities. Can use a hybrid templated/de novo approach. C...A2 - MIRA (Mimicking Intelligent Read Assembly) is able to perform true hybrid de-novo assemblies using read...3513 days ago
3823 days ago
Internship in Computational Biology
We are looking for a motivated and autonomous intern to study gene expression in hybrid organisms. The student will work on natural hybrids of two or three different species of fungal endosymbionts of grasses...3525 days ago
2069 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
LoRDEC is a program to correct sequencing errors in long reads from 3rd generation sequencing with high error rate, and is especially intended for PacBio reads. It uses a hybrid strategy, meaning that it uses two sets of reads: the reference read set, whose error rate is assumed to be small, and ...Tags: Bioinformatics, LoRDEC, Hybrid, Error, Correction, Program, Long, PacBio, Reads, Illumina
2576 days ago
Unicycler: Hybrid assembly pipeline for bacterial genomes
Unicycler is an assembly pipeline for bacterial genomes. It can assemble Illumina-only read sets where it functions as a SPAdes-optimiser. It can also assembly long-read-only sets (PacBio or Nanopore) where it runs a miniasm+Racon pipeline. For the best possible asse...Tags: Unicycler, Hybrid, assembly, pipeline, bacterial, genomes
2362 days ago