Results for "In silico"
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...yotic two-component system protein-protein interactions (PPIs). The methods implemented in MetaPred2CS are 2 co-evolutionary methods: in-silico two hybrid (i2h) and&nbs...2634 days ago
UCSC Genome Browser and Blat software !
...kent/src/hg/autoXmlFor information about commercial licensing of the Genome Browser software, see http://genome.ucsc.edu/license/. The Blat and In-Silico PCR software may be commercia...3013 days ago
- ...s from a shotgun assembly are typically linked together in a graph structure that can serve to guide finishing and in some case close gaps in-silico. Also, in many cases, sequenc...
2556 days ago
eQuant : energy-based quality assessment of protein
Protein structures are of varying quality. Especially, in-silico modeled structures are prone to contain serious errors, which limit the usefulness and reliability of these...2521 days ago
NanoSim: nanopore sequence read simulator based on statistical characterization.
...profiles serving as the input to the next step, the simulation stage. The simulation stage uses the model built in the previous step to produce in silico reads for a given reference g...2344 days ago
CAMSA :: a tool for Comparative Analysis and Merging of Scaffold Assemblies
...number of scaffold assemblies in de-novo non-progressive fashion allows to simultaneously work with scaffold assemblies obtained from any in silico and in vitro t...2334 days ago
Digest: In silico restriction digest of complete genomes
This tool allows to retrieve number of cleavages yielded by commercially available endonucleases in up-to-date sequenced prokaryotic genomes. When the number of fragmen...2197 days ago
ContigExtender: a new approach to improving de novo sequence assembly for viral metagenomics data
...ores multiple extending paths to achieve longer and highly accurate contigs. ContigExtender is effective for extending contigs significantly in in silico synthesized and real metageno...11 days ago
