Taverna Workflow Management System
Taverna is an open source domain independent Workflow Management System – a suite of tools used to design a...hrough a range of organisations and projects. The Taverna suite is written in Java and...3926 days ago
Java and BioJava Tutorial links
BioJava provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of this bookmark is to provide useful links for bioinformatician. Please add more useful Java and BioJava links here ...3914 days ago
Bioinformatician’s Pocket Reference !!
It is amusing how brain of bioinformaticians work! Learning a new programming langu...s!) in our own mother-tongue. Today every bioinformatician keeps more than few languages and core IT toolkits on their...3630 days ago
Java utilities for Next Generation Sequencing by Pierre Lindenbaum
Java utilities for Bioinformatics https://github.com/lindenb/jvarkit3530 days ago
3348 days ago
Trimmomatic: A flexible read trimming tool for Illumina NGS data
Paired End: java -jar trimmomatic-0.35.jar PE -phred33 input_forward.fq.gz input_reverse.fq.gz output_forward_paired.fq.gz output_forward_unpaired.fq.gz output_reverse_...2953 days ago
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2808 days ago
CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications and websites, or a...2796 days ago
2785 days ago