Tools for bacterial whole genome annotation
...ly a few genomes to annotate). Prokka – Standalone...which is in-built in RAST. NCBI Prokaryotic Genome Annotation Pipel...NCBI has developed an automatic prokaryotic genome annotation pipel...on pipeline. MAKER allows smaller eukaryotic and prokaryotic genome...2345 days ago
Bioinformatics Web Application Development with Perl
...verage app might need in a single download. It's still fully compatible with the CPAN, but the intention is to provide good working defaults in a package that's easy to start with....2335 days ago
List of visualization tools for network biology
...net.systemsbiology.net/software/Dizzy/ DyCoNet Gephi plugin that can be used to identify dynamic communities in networks https://github.com/juliemkauffman/DyCoNet GENeVis ...2302 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
...ion 1: 28 Feb 2018, 9 AM CETSession 2: 28 Feb 2018, 8 AM PSTRegister here: http://www.strand-ngs.com/webinar_registration About Speaker: Dr. Suman Kapoor, Manager- Application Sci...2277 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
...l gene transfer (HGT), the “non-sexual movement of genetic material between two organisms” , is relatively common in prokaryotes and single-celled eukaryotes, but a number of factor...864 days ago
Some useful Bioinformatics links
...software/RepeatFinder/RepeatFinderReprint.pdf https://bernatgel.github.io/karyoploter_tutorial//Tutorial/CreateIdeogram/CreateIdeogram.html https://bernatgel.github.io/karyoploter_tutorial//Tutorial/C...2255 days ago
Installing Bio::SCF perl module
...aden.sourceforge.net). This can be downloaded from https://sourceforge.net/project/showfiles.php?group_id=100316&package_id=108243&release_id=340318 confirm that the package installed correctly look fo...2232 days ago
2204 days ago
Creating conda environment for python2.7
...To create an environment with a specific package: conda create -n myenv...e an environment with a specific version of a package: conda create -n myenv...icular environment, use the --no-default-packages flag: conda crea...2203 days ago
Learning Python Programming - a bioinformatician perspective !
...cessing. In this tutorial series article, I will explore features and packages of python which are widely...ogical example which shows NGS data processing with the help of python packages and programming. Python h...2196 days ago