Results for "Lateral gene transfer PLOS"
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Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to understand the differe...in types are metabolic pathways, gene regulatory pathways, and sign...uilding, visualizing and sharing gene regulatory network models ove....html GenMAPP Visualization of gene exp...nted pathways and reactions from gene...2281 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...llaborate with others without transferring data Integrates microarray and next generation sequencing data Go...al-based prior p(genotype) to generate posterior probabilities...end using GATK or samtools to generate) Output: out_vcf UNCeqr...e version gives comprehensive gene...2902 days ago
Worldwide funding agencies to fund your bioinformatics research !!
Are you seeking funding for research or training in a particular area? Check...ants to research students in the areas of general and applied science. BD B...to consider one of these prestigious (and generous...s scientific knowledge and train the next gene...2932 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered t...the genome.Interspersed RepeatsProcessed Pseudogenes, Retrotranscripts, SINES - Non-functional copies of RNA genes wh...phrase "able was I ere I saw elba")—with gene...2205 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation GeneSCF serves as command line tool for clustering the list of genes given by the users based on functi...res gene list in the form of Entrez Gene ID...540 The advantage of using Gene...2865 days ago
- Bash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9 ...0cb57a29/sample.GTF) file to annotation table format. It generate...7321c5ae57fc8b4a14c7f4/sample.GTF_enst_annotation.txt)2) Gene...
2100 days ago
- alignment: the mapping of a raw sequence read to a location within a referen...ith quality scores for each base; usually generated by sequencing machines....ying structural rearrangements, including gene fus...rearrangements. See also BCF format. NextGene...
2863 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence re...extend seed reads (or contigs generated by another assembler) in...d Read LinkAge COCACOLA: a general framework for binning cont...many functionalities, and can generate much longer repeats than...REconstruct 16S ribosomal RNA Genes fr...2679 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl framew... - Haml parser in Perl jploski/epic-ide - EPIC - Ecli...erface to 0MQ2 trizen/obmenu-generator - A fast menu gener...(amimoto) this repository was transfered to Norbert Truchsess (ntruc...lection of utilities for Next-Generation Sequencing (NGS) data a...2483 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have ori...a descended from a major cladogenesis event, recognized by posse...group is said to be extinct. genetic marker -- A DNA sequence t...a family includes one or more genera, and so on. relatedness --...2456 days ago
