Results for "Linux Server"
Bio-Scripts
Installing Platypus on Ubuntu !
(py27) ➜ Tools git:(master) ✗ git clone https://github.com/andyrimmer/Pl...c878c0996/Cython-0.29-cp27-cp27mu-manylinux1_x86_64.whl (2.0MB) 100%...cython/htslibWrapper.c -o build/temp.linux-x86_64-2.7/cython/htslibWrapp...c tabix/bgzip.c.pysam.c -o build/temp.linux-...2018 days ago
- Download page https://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Downlo...m.nih.gov/blast/executables/blast+/LATEST/ncbi-blast-2.8.1+-x64-linux.tar.gz # decompress tar -zxvf ncbi-blast-2.8.1+-x64-linux....
1760 days ago
Bash commandline to install Anaconda !
...nda.com/archive/Anaconda3-2019.03-Linux-x86_64.sh % Total % R...$ sha256sum Anaconda3-2019.03-Linux-x86_64.sh 45c851b7497cc14d5c...64.sh $ bash Anaconda3-2019.03-Linux-x86_64.sh In order to cont...y37_0 ... installing: jupyterlab_server-0.2.0-py37_0 ... installing:...1554 days ago
Bash command to install Miniconda !
(base) [wsu29@bladeamd-2 tmp]$ wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh --2020-02-01 13:25...Saving to: `Miniconda3-latest-Linux-x86_64.sh' 100%[==========..._libgcc_mutex pkgs/main/linux-64::_libgcc_mutex-0.1-main...libgcc-ng pkgs/main/linux-...1554 days ago
Bash command to install bwa, samtools, picard !
...nconsistency: - defaults/linux-64::numba==0.43.1=py37h962f231_0 - defaults/linux-64::anaconda==2019.03=py37_0..._anaconda_depends pkgs/main/linux-64::_anaconda_depends-2019.03...bzip2 pkgs/main/linux-64::bzip2-1.0.8-h7b6447c_0...2 KB binutils_impl_linux-...1554 days ago
Bash command to install GATK, Bedtools and SnpEff !
(my_GATK) [wsu29@bladeamd-2 tmp]$ conda install gatk Collecting package...ED: certifi pkgs/main/linux-64::certifi-2019.11.28-py38_0...3.8-7 pip pkgs/main/linux-64::pip-20.0.2-py38_1 pyth...LED: bedtools bioconda/linux-...1554 days ago
- #More at https://developer.nvidia.com/cuda-downloads?target_os=Linux&target_arch=x86_64&target_distro=Ubuntu&target_version=1804&target_type=deblocal $ wget https://developer.downlo...
1552 days ago
Install Nucmer on Linux / Ubuntu
jit@jit-HP-Pro-3335-MT:~/Downloads/MitoHunter$ sudo apt install mummer [sudo] password for jit: Reading package lists... Done Building dependency tree Readi...1549 days ago
Install python pip and numpy on Linux / Ubuntu
jit@jit-HP-Pro-3335-MT:~/Downloads/MitoHunter$ sudo apt install python-pip Reading package lists... Done Buildin...9e2624e205445ab77a1848acdaa2929a00eeef6b16eaaeb20/numpy-1.16.6-cp27-cp27mu-manylinux1...1549 days ago
Install miniasm in Linux / Ubuntu
jit@jit-HP-Pro-3335-MT:~/Downloads/MitoHunter$ sudo apt install miniasm Reading package lists... Done Building dependency tree Reading state information... Do...1549 days ago
