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...o;s group. Again, running spades.py will show you the options: spades.py This produces: SPAdes genome assembler v3.10.1 Usage: /usr/local/SPAdes-3.10.1-Linux/bin/spade...2347 days ago
Bioinformatics Web Application Development with Perl
...eral deployment mechanisms exist to meet various business needs which also support PSGI. In particular, you can deploy the same application with a local testing server on your own ma...2318 days ago
PerlOneLiner for Bioinformatician
...:00:00 UTC)perl -le 'print time' # Print GMT (Greenwich Mean Time) and local computer timeperl -le 'print scalar gmtime'perl -le 'print scalar localtime' # Print local computer...2299 days ago
Installing Bio::SCF perl module
...][sudo] password for jitendra: rm -f /usr/local/lib/libz.acp libz.a /usr/local/libchmod 644 /usr/local/lib/l...-I../scf -I../exp_file -I../utils -I/usr/local/include -fPIC -MT fpoint.o -M...-I../scf -I../exp_file -I../utils -I/usr/local/include -fPIC -MT extract_seq...2215 days ago
Tools for Protein-Protein Docking !
...od solutions, filtering using a priori information and small, local rigid rotations around select...escoring by binding electrostatics and desolvation energy RosettaDock Local rigid search: Monte Carlo wit...2199 days ago
Gap filling or Contigs extensions tools !
...e gap within paired reads" or "Toward almost closed genomes with GapFiller". There are also some tools like GAPresolution that can help to perform local re-assemblies using 454 reads...2161 days ago
Parallel Processing with Perl !
...concatenation of the output each child generates, since it does take some time(remember 100GB). I think now you can use a mysql database LOAD DATA LOCAL INFILE command to load all th...2076 days ago
- ...s code as 'root' as a system tool in /usr/local/src, so do not scream at me for that.First I created an /usr/local/src/blat directory and I copi...good enough. I wanted the executables in /usr/local/bin where all my other code g...
2059 days ago
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