Results for "Long"
Bio-Scripts
...nt)’: /home/urbe/Tools/nextsv/aligners_and_callers/Sniffles-1.0.5/src/realign/SWCPU.cpp:30:71: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3...2098 days ago
- Map them agaist reference avaga genome using following codes git clone https://github.com/lh3/bwa.git cd bwa; make bwa index ref.fa bwa mem -x pacbio ref.fa pacbio.fq > aln.sam bwa mem -x ont2d ref.fa ont-2D.fq > aln.sam
1724 days ago
Installing ggplot2 and its dependencies on Ubuntu !
...the C preprocessor... gcc -std=gnu99 -E checking for grep that handles long lines and -e... /bin/grep ch...nu++11 accepts -g... yes checking whether the C++ compiler supports the long long type... yes checking wh...1549 days ago
Pack a perl program with their dependencies on Ubuntu !
...r key is released... Evaluation of genome assembly software based on long readsBy BioStar 409 days ago Evaluationgenomeassemblysoftwarelongreads TGS technologies...1510 days ago
- (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen s...
1214 days ago
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
...', 'File::Temp', 'File::Spec::Functions', 'Statistics::Multtest', 'File::Path', 'Statistics::Distributions', 'Getopt::Long', 'Statistics::R',...1159 days ago
- ...', 'File::Temp', 'File::Spec::Functions', 'Statistics::Multtest', 'File::Path', 'Statistics::Distributions', 'Getopt::Long', 'Statistics::R',...
1157 days ago
Perl script to check modules installed !
...', 'File::Temp', 'File::Spec::Functions', 'Statistics::Multtest', 'File::Path', 'Statistics::Distributions', 'Getopt::Long', 'Statistics::R',...1154 days ago
- ...ev libstdc++-7-dev libsys-hostname-long-perl libtcl8.6 libtinfo-dev l...ev libstdc++-7-dev libsys-hostname-long-perl libtcl8.6 libtinfo-dev l...bionic/main amd64 libsys-hostname-long-perl all 1.5-1 [11.7 kB]...unselected package libsys-hostname-long-perl. Preparing to unpack .....
1053 days ago
- #Long reads bedtools bamtofastq -i input.bam -fq output.fastq #For paired-end reads: samtools sort -n input.bam -o input_sorted.bam # sort reads by identifier-name (-n) bedtools bamtofastq -i input_sorted.bam -fq output_r1.fastq -fq2 output_r2.fastq
995 days ago
