Structural variation: the hidden genomic treasure
...BreakDancer http://breakdancer.sourceforge.net/ Variation Hunter http://compbio.cs.sfu.ca/software-variation-hunter Lumpy https://github.com/arq5x/lumpy-sv ForestSV http://seba...2702 days ago
2809 days ago
1436 days ago
Some useful Bioinformatics links
...pping of nanopore sequencing reads with GraphMap | Nature Communications https://www.nature.com/articles/ncomms11307 lumpy-sv/extractSplitReads_BwaMem at master · arq5x/lumpy-sv https://github.com/arq5x/...2241 days ago
Download lumpy skin disease data !
Location https://www.ncbi.nlm.nih.gov/sra?linkname=bioproject_sra_all&from_uid=880745 The raw genome sequence data from the 2022 outbreak in India is available in the SRA Project PRJNA880745409 days ago
Tags: Bioinformatics, Analysis, NGS, Lumpy, SV, Variation, Structure, Genome
2809 days ago
Comment on "List of non-commercial NGS genotype-calling software"
Delly – Structural variant discovery by integrated paired-end and split-read analysis. [ paper-2012 ] lumpy – lumpy: a general probabilistic framework for stru...1141 days ago