...parties) are coordinated to achieve biological meaning. We have pioneered methods to predict, dissect, and control large-scale gene regulatory programs; these methods have provided...
...ab's research involves applications of graph theory, mathematical modeling, and computational techniques to solving large-scale problems in computational and systems biology.They are interested i...
...ning: developing graph theoretic, mathematical, and computational algorithms for efficient extraction of f...biological, social, and technological networks.
Computational and systems biology: studying the interpl...
Bioinformatics relevant research topics are:
genomic scale studies
endogenous mechanisms of mutations, germ line and somatic
computational aspects of immunology in cancer
si...
...xpression regulation: statistical and computational foundations.
Cancer genomics, genomes as biomarkers, cancer phylogeny.
Image analysis for systems biology: measuring the dynami...
The Pandey Lab at Johns Hopkins University is a Systems Biology lab that combines molecular biology, analytical chemistry and computational biology with various "Omics" technologies...
...hancement strategies for production of therapeutic compounds by cell and tissue cultures of Tinospora cordifolia (willd.) Miers ex Hook. F. & Thoms"
"Program support for Com...
We are interested in the study of complex systems in living organisms. Novel views augmenting the classical gene by gene approaches are required to overcome the engineered redundancies and co...
...atics, I have been using hidden Markov models (HMMs). As a postdoc with David Hau...ler at UCSC we developed the so-called profile HMMs (refs). Since then I have app...or such things as discriminative estimation of HMMs (refs) and alternative decodi...
...pumps (RND family)
Functioning of efflux systems in Gram-negative bacteria
De...nteractions
Action of inhibitors on efflux systems
Structural and dynamical fea...ux of antibiotics through porins and efflux systems
Setup of protocol to integra...